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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9393897 chr6:28127710 G/T BTN3A2 chr6:26365387-26378548:+ -0.3 -6.31 6.3E-10 Box Plot
THCA rs9393898 chr6:28130376 G/T BTN3A2 chr6:26365387-26378548:+ -0.29 -6.21 1.13E-9 Box Plot
THCA rs9393899 chr6:28133528 G/C BTN3A2 chr6:26365387-26378548:+ -0.3 -6.31 6.3E-10 Box Plot
THCA rs9393901 chr6:28136797 A/G BTN3A2 chr6:26365387-26378548:+ -0.3 -6.31 6.3E-10 Box Plot
THCA rs9393908 chr6:28190830 T/A BTN3A2 chr6:26365387-26378548:+ -0.6 -10.44 4.02E-23 Box Plot
THCA rs9393908 chr6:28190830 T/A ZFP57 chr6:29640169-29648887:- 0.57 6.62 9.97E-11 Box Plot
THCA rs9393909 chr6:28207200 A/G BTN3A2 chr6:26365387-26378548:+ 0.39 7.03 7.04E-12 Box Plot
THCA rs9393910 chr6:28208192 C/G BTN3A2 chr6:26365387-26378548:+ -0.4 -8.39 5.34E-16 Box Plot
THCA rs9407029 chr9:45440 C/A LOC100288778 chr12:74272-91262:+ 0.33 8.3 1.08E-15 Box Plot
THCA rs9407029 chr9:45440 C/A WASH5P chr19:60951-71626:- -0.47 -11.62 1.17E-27 Box Plot
THCA rs9410071 chr9:141003534 G/A TUBB4Q chr4:190903679-190906024:- 0.5 8.95 7.95E-18 Box Plot
THCA rs9410176 chr9:141051920 A/G TUBB4Q chr4:190903679-190906024:- -0.76 -14.4 2.57E-39 Box Plot
THCA rs941329 chr2:132273493 C/T CCDC74B chr2:130896860-130902707:- 0.4 7.14 3.39E-12 Box Plot
THCA rs941331 chr2:132267264 C/T CCDC74B chr2:130896860-130902707:- 0.42 7.46 4.13E-13 Box Plot
THCA rs941332 chr2:132188005 C/T CCDC74B chr2:130896860-130902707:- 0.38 6.97 1.04E-11 Box Plot